#!/bin/csh

bruk2pipe -in ./ser -bad 0.0 -swap -DMX -decim 16 -dspfvs 12  \
  -xN              1280  -yN               130  -zN                48  \
  -xT               640  -yT                65  -zT                24  \
  -xMODE            DQD  -yMODE  Echo-AntiEcho  -zMODE        Complex  \
  -xSW        11160.714  -ySW         2594.875  -zSW         3923.492  \
  -xOBS         800.154  -yOBS          81.088  -zOBS         201.209  \
  -xCAR           4.725  -yCAR         119.022  -zCAR          55.685  \
  -xLAB              1H  -yLAB             15N  -zLAB             13C  \
  -ndim               3  -aq2D          States                         \
  -out ./data/3d%03d -verb -ov

echo Processing XY Dimension.

xyz2pipe -in data/3d%03d -x -verb                       \
| nmrPipe  -fn POLY -time                                      \
| nmrPipe  -fn SP -off 0.40 -end 1.00 -pow 1 -c 0.5             \
| nmrPipe  -fn ZF -size 1280                                    \
| nmrPipe  -fn FT                                               \
| nmrPipe  -fn PS -p0 26.0 -p1 0.0  -di                       \
| nmrPipe  -fn EXT -x1 5.8ppm -xn 11.1ppm -sw                   \
| nmrPipe  -fn TP                                               \
| nmrPipe  -fn PS -p0 0.0 -p1 0.0                       \
| nmrPipe  -fn SP -off 0.5 -end 0.9 -pow 1 -c 0.5            \
| nmrPipe  -fn ZF                                               \
| nmrPipe  -fn FT                                               \
| nmrPipe  -fn PS -p0 0.0 -p1 0.0 -di                        \
#| nmrPipe  -fn REV 					\
| nmrPipe  -fn TP                                               \
#| nmrPipe  -fn POLY -auto 				     \
| pipe2xyz  -out  dat/3d%03d.DAT -verb -ov

#/bin/rm -r data

echo Done.
echo Processing Z Dimension With Linear Prediction

xyz2pipe -in dat/3d%03d.DAT -z -verb                     \
| nmrPipe  -fn PS -p0 0.0 -p1 0.0                         \
| nmrPipe  -fn LP -fb                       \
| nmrPipe  -fn SP -off 0.5 -end 1.00 -pow 2 -c 1.0            \
| nmrPipe  -fn ZF -auto                                    \
| nmrPipe  -fn FT                                             \
| nmrPipe  -fn PS -p0 -41.0 -p1 180.0 -di                        \
| pipe2xyz -out mat/3d%03d.DAT -z -verb -ov

/bin/rm -r dat

echo Done.
echo Processing Y Dimension With Linear Prediction

xyz2pipe -in mat/3d%03d.DAT -y -verb                     \
| nmrPipe  -fn HT 			 \
| nmrPipe  -fn PS -p0 0.0 -p1 0.0 -inv 	             \
| nmrPipe  -fn FT -inv					     \
| nmrPipe  -fn ZF -inv                                       \
| nmrPipe  -fn SP -off 0.5 -end 0.9 -pow 1 -c 0.5 -inv       \
| nmrPipe  -fn LP -ps0-0                      \
| nmrPipe  -fn SP -off 0.5 -end 1.0 -pow 2 -c 1.0            \
| nmrPipe  -fn ZF                                   \
| nmrPipe  -fn FT                                            \
| nmrPipe  -fn PS -p0 0.0 -p1 0.0 -di                    \
| nmrPipe  -fn REV 			\
| nmrPipe  -fn TP 					     \
| nmrPipe  -fn POLY -auto 				     \
| nmrPipe  -fn TP		\
| pipe2xyz -out mat1/3d%03d.DAT -z -verb -ov

/bin/rm -r mat
echo Done.